Finding the unloaded geometry

Finding the unloaded geometryΒΆ

from fenics_plotly import plot
import pulse
geometry = pulse.HeartGeometry.from_file(pulse.mesh_paths["simple_ellipsoid"])
# geometry = pulse.geometries.prolate_ellipsoid_geometry(mesh_size_factor=3.0)
material = pulse.NeoHookean()
# material = pulse.Guccione()
2022-10-01 06:18:23,822 [254] INFO     pulse.geometry_utils: 
Load mesh from h5
# Parameter for the cardiac boundary conditions
bcs_parameters = pulse.MechanicsProblem.default_bcs_parameters()
bcs_parameters["base_spring"] = 1.0
bcs_parameters["base_bc"] = "fix_x"
# Create the problem
problem = pulse.MechanicsProblem(geometry, material, bcs_parameters=bcs_parameters)
# Suppose geometry is loaded with a pressure of 1 kPa
# and create the unloader
unloader = pulse.FixedPointUnloader(problem=problem, pressure=3.0)
2022-10-01 06:18:48,484 [254] INFO     pulse.unloader: 

-------------------------- Unloading options ---------------------------

	Target pressure: 3.0
	maxiter = 10
	tolerance = 0.0001
	regenerate_fibers (serial only)= False

------------------------------------------------------------------------
# Unload the geometry
unloader.unload()
2022-10-01 06:18:48,490 [254] INFO     pulse.unloader: ------------------------------------------------------------------------
2022-10-01 06:18:48,491 [254] INFO     pulse.unloader: ----------------------------Start unloading-----------------------------
2022-10-01 06:18:48,493 [254] INFO     pulse.unloader: ------------------------------------------------------------------------
2022-10-01 06:18:53,334 [254] INFO     pulse.unloader: 
LV Volume of original geometry = 0.749 ml
2022-10-01 06:18:53,355 [254] INFO     pulse.unloader: 
Do an intial solve
2022-10-01 06:20:57,668 [254] INFO     pulse.unloader: 
Iteration: 0
2022-10-01 06:21:04,573 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/quadrature/quadraturerepresentation.py:58: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
  Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-10-01 06:21:04,626 [254] WARNING  FFC:   Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-10-01 06:21:10,715 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:21:10,720 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/quadrature/quadraturerepresentation.py:58: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
  Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-10-01 06:21:10,776 [254] WARNING  FFC:   Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-10-01 06:21:11,327 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:21:11,388 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:21:11,389 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:21:11,447 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:21:11,448 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:21:11,503 [254] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.568 ml
2022-10-01 06:22:52,357 [254] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.568 ml
2022-10-01 06:22:52,578 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:52,580 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:52,639 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:52,640 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:52,698 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:52,699 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:52,752 [254] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.717 ml
2022-10-01 06:22:52,769 [254] INFO     pulse.unloader: 
Residual:	0.011328623428538397
2022-10-01 06:22:52,770 [254] INFO     pulse.unloader: 
Iteration: 1
2022-10-01 06:22:52,991 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:52,993 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:53,051 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:53,053 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:53,111 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:53,112 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:53,165 [254] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.596 ml
2022-10-01 06:22:57,624 [254] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.596 ml
2022-10-01 06:22:57,846 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:57,848 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:57,906 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:57,908 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:57,966 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:57,968 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:58,020 [254] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.754 ml
2022-10-01 06:22:58,037 [254] INFO     pulse.unloader: 
Residual:	0.0016980102145404186
2022-10-01 06:22:58,038 [254] INFO     pulse.unloader: 
Iteration: 2
2022-10-01 06:22:58,259 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:58,261 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:58,320 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:58,321 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:58,380 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:58,381 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:22:58,433 [254] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.592 ml
2022-10-01 06:23:02,900 [254] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.592 ml
2022-10-01 06:23:03,121 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:03,123 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:03,182 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:03,183 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:03,241 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:03,243 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:03,295 [254] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.749 ml
2022-10-01 06:23:03,312 [254] INFO     pulse.unloader: 
Residual:	0.00025928769312979117
2022-10-01 06:23:03,313 [254] INFO     pulse.unloader: 
Iteration: 3
2022-10-01 06:23:03,535 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:03,537 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:03,595 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:03,596 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:03,653 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:03,660 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:03,711 [254] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.593 ml
2022-10-01 06:23:08,160 [254] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.593 ml
2022-10-01 06:23:08,381 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:08,383 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:08,443 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:08,444 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:08,503 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:08,505 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:08,558 [254] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.750 ml
2022-10-01 06:23:08,574 [254] INFO     pulse.unloader: 
Residual:	3.931304295921651e-05
2022-10-01 06:23:08,577 [254] INFO     pulse.unloader: ########################################################################
Unloading suceeding
# Get the unloaded geometry
unloaded_geometry = unloader.unloaded_geometry
2022-10-01 06:23:08,804 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:08,805 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:08,865 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:08,867 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:08,924 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-10-01 06:23:08,926 [254] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
fig = plot(geometry.mesh, opacity=0.0, show=False)
fig.add_plot(plot(unloaded_geometry.mesh, color="red", show=False))
fig.show()